Using the CLI

Bio2BEL automatically installs a command line interface with Python’s entry-points. It can be accessed with either python3 -m bio2bel or just as bio2bel from your favorite terminal.

It dynamically loads all Bio2BEL modules installed so commands are aliased.

  • bio2bel_mirtarbase populate can be accessed as bio2bel mirtarbase populate

  • bio2bel populate runs all possible repositories’ populate commands.