Bio2BEL ADEPTUS
Bio2BEL ADEPTUS.
Manager for Bio2BEL ADEPTUS.
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class
bio2bel_adeptus.manager.Manager(*args, **kwargs)[source]
Manages the Bio2BEL ADEPTUS database.
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is_populated()[source]
Check if the Bio2BEL ADEPTUS database is populated.
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populate()[source]
Populate the Bio2BEL ADEPTUS database.
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summarize()[source]
Summarize the contents of the Bio2BEL ADEPTUS database.
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to_bel()[source]
Output ADEPTUS as a BEL graph.
SQLAlchemy models for Bio2BEL ADEPTUS.
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class
bio2bel_adeptus.models.Base(**kwargs)
The most base type
bio2bel_adeptus
Default connection at
using Bio2BEL v0.2.0
bio2bel_adeptus [OPTIONS] COMMAND [ARGS]...
Options
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-c, --connection <connection>
Defaults to
bel
Manage BEL.
bio2bel_adeptus bel [OPTIONS] COMMAND [ARGS]...
upload
Upload BEL to network store.
bio2bel_adeptus bel upload [OPTIONS]
Options
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-c, --connection <connection>
write
Write as BEL Script.
bio2bel_adeptus bel write [OPTIONS]
Options
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-o, --output <output>