Index

A

add_to_graph() (bio2bel_mirtarbase.models.Evidence method)

as_bel() (bio2bel_mirtarbase.models.Mirna method)

B

bio2bel_mirtarbase.manager (module)

bio2bel_mirtarbase.models (module)

C

count_evidences() (bio2bel_mirtarbase.manager.Manager method) count_interactions() (bio2bel_mirtarbase.manager.Manager method)

count_mirnas() (bio2bel_mirtarbase.manager.Manager method) count_species() (bio2bel_mirtarbase.manager.Manager method) count_targets() (bio2bel_mirtarbase.manager.Manager method)

E

edge_model (bio2bel_mirtarbase.manager.Manager attribute) enrich_mirnas() (bio2bel_mirtarbase.manager.Manager method) enrich_rnas() (bio2bel_mirtarbase.manager.Manager method)

entrez_id (bio2bel_mirtarbase.models.Mirna attribute) (bio2bel_mirtarbase.models.Target attribute) Evidence (class in bio2bel_mirtarbase.models) experiment (bio2bel_mirtarbase.models.Evidence attribute)

F

filter_name_in() (bio2bel_mirtarbase.models.Mirna static method)

G

get_mirna_interaction_evidences() (bio2bel_mirtarbase.manager.Manager method)

H

hgnc_id (bio2bel_mirtarbase.models.Target attribute)

hgnc_symbol (bio2bel_mirtarbase.models.Target attribute)

I

Interaction (class in bio2bel_mirtarbase.models)

interaction_id (bio2bel_mirtarbase.models.Evidence attribute) is_populated() (bio2bel_mirtarbase.manager.Manager method)

L

list_evidences() (bio2bel_mirtarbase.manager.Manager method)

M

Manager (class in bio2bel_mirtarbase.manager) mirbase_id (bio2bel_mirtarbase.models.Mirna attribute)

Mirna (class in bio2bel_mirtarbase.models) mirna_id (bio2bel_mirtarbase.models.Interaction attribute) mirtarbase_id (bio2bel_mirtarbase.models.Interaction attribute)

N

name (bio2bel_mirtarbase.models.Mirna attribute) (bio2bel_mirtarbase.models.Species attribute) (bio2bel_mirtarbase.models.Target attribute)

P

populate() (bio2bel_mirtarbase.manager.Manager method)

Q

query_mirna_by_hgnc_identifier() (bio2bel_mirtarbase.manager.Manager method) query_mirna_by_hgnc_symbol() (bio2bel_mirtarbase.manager.Manager method) query_mirna_by_mirtarbase_identifier() (bio2bel_mirtarbase.manager.Manager method)

query_mirna_by_mirtarbase_name() (bio2bel_mirtarbase.manager.Manager method) query_target_by_entrez_id() (bio2bel_mirtarbase.manager.Manager method) query_target_by_hgnc_identifier() (bio2bel_mirtarbase.manager.Manager method) query_target_by_hgnc_symbol() (bio2bel_mirtarbase.manager.Manager method)

R

reference (bio2bel_mirtarbase.models.Evidence attribute)

S

serialize_to_entrez_node() (bio2bel_mirtarbase.models.Target method) serialize_to_hgnc_node() (bio2bel_mirtarbase.models.Target method) Species (class in bio2bel_mirtarbase.models)

species_id (bio2bel_mirtarbase.models.Mirna attribute) (bio2bel_mirtarbase.models.Target attribute) summarize() (bio2bel_mirtarbase.manager.Manager method) support (bio2bel_mirtarbase.models.Evidence attribute)

T

Target (class in bio2bel_mirtarbase.models) target_id (bio2bel_mirtarbase.models.Interaction attribute) taxonomy_id (bio2bel_mirtarbase.models.Species attribute)

to_bel() (bio2bel_mirtarbase.manager.Manager method) to_json() (bio2bel_mirtarbase.models.Species method) (bio2bel_mirtarbase.models.Target method)